Hpcsim - Software

1. Operating System
   • ROCKS 4.0.0 Cluster OS (Whitney)
2. Job Management System
   • Portable Batch System
   • MAUL scheduler
3. Compilers, Languages
   • Intel Fortran/C/C++ Compiler for Linux V10.1
   • PGI Fortran/C/C++ Compiler for Linux V6.2
   • GNU 3.4.3/4.0.1/4.2.2 Fortran/C/C++ Compiler
4. Mathematic libraries
   • FFTW 3.0.1
   • Intel Math Kernel Library 10
   • SPRNG 2.0a(C/Fortran)
5. Message Passing Interface (MPI) Libraries
   • MPICH 1.2.7
   • LAM/MPI 7.1.4
   • OPEN MPI 1.2.5
6. Third-party Applications
   • GAMESS (27 June,2005)
   • GROMACS 3.3
   • MATLAB 7.0.4
   • NAMD 2.6
   • R 2.4.1
   • VMD 1.8.5
   • Xmgrace 5.1.20